EnhancerDB
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  3. rs564816435[chr1:41852822]
Enhancers that have rs564816435[chr1:41852822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564816435[chr1:41852822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41852814 41852834 TP53 JASPAR yes 28383511
chr1 41852816 41852827 NFE2L2 JASPAR yes 28383512
chr1 41852821 41852832 NFKB1 JASPAR yes 28383513
Genes associated with rs564816435[chr1:41852822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More