EnhancerDB
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  3. rs564850122[chr12:125219921]
Enhancers that have rs564850122[chr12:125219921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564850122[chr12:125219921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125219649 125219939 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582466
chr12 125219661 125220115 ZNF274 GTRD no Blood (GM12878) 21582467
chr12 125219799 125220095 ZNF274 GTRD no Blood (GM12878) 21582468
chr12 125219907 125219925 IRF2 JASPAR yes 124415371
chr12 125219911 125219925 STAT1 JASPAR yes 124415372
chr12 125219912 125219926 IRF7 JASPAR yes 124415373
chr12 125219912 125219926 IRF8 JASPAR yes 124415374
chr12 125219912 125219927 IRF9 JASPAR yes 124415375
chr12 125219917 125219937 RREB1 JASPAR yes 124415376
chr12 125219919 125219939 RREB1 JASPAR yes 124415377
chr12 125219921 125219941 RREB1 JASPAR yes 124415378
Genes associated with rs564850122[chr12:125219921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More