EnhancerDB
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  3. rs564892542[chr3:58028072]
Enhancers that have rs564892542[chr3:58028072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564892542[chr3:58028072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58028066 58028087 IRF1 JASPAR yes 2668376
chr3 58028067 58028088 IRF1 JASPAR yes 2668377
chr3 58028068 58028083 STAT2 JASPAR yes 2668378
chr3 58028069 58028090 IRF1 JASPAR yes 2668379
chr3 58028070 58028091 IRF1 JASPAR yes 2668380
chr3 58028071 58028086 FOXP1 JASPAR yes 2668381
chr3 58028071 58028092 IRF1 JASPAR yes 2668382
chr3 58028072 58028087 FOXP1 JASPAR yes 2668383
Genes associated with rs564892542[chr3:58028072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More