EnhancerDB
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  3. rs565045085[chr1:1779660]
Enhancers that have rs565045085[chr1:1779660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565045085[chr1:1779660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1779649 1779664 MEF2C JASPAR yes 26206355
chr1 1779649 1779670 IRF1 JASPAR yes 26206356
chr1 1779650 1779665 MEF2A JASPAR yes 26206357
chr1 1779651 1779663 MEF2A JASPAR yes 26206358
chr1 1779651 1779663 MEF2B JASPAR yes 26206359
chr1 1779651 1779663 MEF2D JASPAR yes 26206360
chr1 1779652 1779662 MEF2A JASPAR yes 26206361
chr1 1779653 1779668 FOXP1 JASPAR yes 26206362
chr1 1779659 1779665 TBP TRANSFAC yes 26206363
Genes associated with rs565045085[chr1:1779660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More