EnhancerDB
  1. Home
  2. SNP
  3. rs565077543[chr1:154379999]
Enhancers that have rs565077543[chr1:154379999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565077543[chr1:154379999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154379998 154380008 SP1 JASPAR yes 32288966
chr1 154379999 154380007 SP1 TRANSFAC yes 32288967
Genes associated with rs565077543[chr1:154379999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More