EnhancerDB
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  3. rs565097861[chr1:235116188]
Enhancers that have rs565097861[chr1:235116188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565097861[chr1:235116188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235113519 235117302 POLR2A UCSC Txn Factor no Conserved 107885189
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402321
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885192
chr1 235115855 235116205 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402500
chr1 235116019 235116259 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21402501
chr1 235116086 235116770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402502
chr1 235116089 235116613 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402503
chr1 235116138 235116518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402504
chr1 235116140 235116520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402505
chr1 235116183 235116195 GLI2 JASPAR yes 36337807
chr1 235116188 235116624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402506
Genes associated with rs565097861[chr1:235116188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More