EnhancerDB
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  3. rs565314394[chr1:52089623]
Enhancers that have rs565314394[chr1:52089623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs565314394[chr1:52089623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52089615 52089634 PAX5 JASPAR yes 28855459
chr1 52089619 52089630 NFE2L2 JASPAR yes 28855460
chr1 52089623 52089627 NFE TRANSFAC yes 28855461
Genes associated with rs565314394[chr1:52089623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More