EnhancerDB
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  3. rs565388090[chr1:19797608]
Enhancers that have rs565388090[chr1:19797608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565388090[chr1:19797608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19797604 19797618 ONECUT3 JASPAR yes 27195077
chr1 19797607 19797617 CUX1 JASPAR yes 27195078
chr1 19797607 19797617 CUX2 JASPAR yes 27195079
Genes associated with rs565388090[chr1:19797608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More