EnhancerDB
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  3. rs565419354[chr1:19741456]
Enhancers that have rs565419354[chr1:19741456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565419354[chr1:19741456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19741446 19741456 GSC2 JASPAR yes 27187441
chr1 19741446 19741456 GSC JASPAR yes 27187442
chr1 19741447 19741468 MAFG JASPAR yes 27187444
Genes associated with rs565419354[chr1:19741456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More