EnhancerDB
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  3. rs565593827[chr17:57434212]
Enhancers that have rs565593827[chr17:57434212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs565593827[chr17:57434212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774768
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774769
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 108275799
chr17 57434181 57434996 ZNF274 GTRD no Blood (GM12878) 21774770
chr17 57434181 57434996 ZNF274 GTRD no Blood (GM12878) 108275800
chr17 57434199 57435132 ZNF274 GTRD no Blood (GM12878) 21774771
chr17 57434199 57435132 ZNF274 GTRD no Blood (GM12878) 108275801
chr17 57434205 57434221 SRF JASPAR yes 55051571
chr17 57434206 57434216 MEF2A JASPAR yes 55051572
chr17 57434208 57434220 SRF JASPAR yes 55051573
chr17 57434211 57434215 TEAD2 TRANSFAC yes 55051574
Genes associated with rs565593827[chr17:57434212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More