EnhancerDB
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  3. rs565627221[chr2:232548228]
Enhancers that have rs565627221[chr2:232548228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232548018 232548333 vista35177
VISTA
Transcript factors that have rs565627221[chr2:232548228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232548211 232548231 RREB1 JASPAR yes 22230170
chr2 232548211 232548231 RREB1 JASPAR yes 81736178
chr2 232548221 232548231 SP1 JASPAR yes 22230178
chr2 232548221 232548231 SP1 JASPAR yes 81736186
chr2 232548222 232548230 SP1 TRANSFAC yes 22230179
chr2 232548222 232548230 SP1 TRANSFAC yes 81736187
chr2 232548222 232548231 SP1 TRANSFAC yes 22230180
chr2 232548222 232548231 SP1 TRANSFAC yes 81736188
chr2 232548222 232548232 SP1 JASPAR yes 22230181
chr2 232548222 232548232 SP1 JASPAR yes 81736189
chr2 232548223 232548228 SP1 TRANSFAC yes 22230182
chr2 232548223 232548228 SP1 TRANSFAC yes 81736190
chr2 232548223 232548234 E2F4 JASPAR yes 22230183
chr2 232548223 232548234 E2F4 JASPAR yes 81736191
chr2 232548224 232548229 SP1 TRANSFAC yes 22230184
chr2 232548224 232548229 SP1 TRANSFAC yes 81736192
chr2 232548224 232548230 SP1 TRANSFAC yes 22230185
chr2 232548224 232548230 SP1 TRANSFAC yes 81736193
Genes associated with rs565627221[chr2:232548228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More