EnhancerDB
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  3. rs565706962[chr13:113378205]
Enhancers that have rs565706962[chr13:113378205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs565706962[chr13:113378205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113378195 113378209 PLAG1 JASPAR yes 60430362
chr13 113378195 113378210 TFAP2A JASPAR yes 60430363
chr13 113378195 113378210 TFAP2C JASPAR yes 60430364
chr13 113378197 113378210 TFAP2A JASPAR yes 60430365
chr13 113378197 113378210 TFAP2B JASPAR yes 60430366
chr13 113378197 113378210 TFAP2C JASPAR yes 60430367
chr13 113378197 113378212 TFAP2A JASPAR yes 60430368
chr13 113378197 113378212 TFAP2C JASPAR yes 60430369
Genes associated with rs565706962[chr13:113378205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More