EnhancerDB
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  3. rs565753254[chr16:88849363]
Enhancers that have rs565753254[chr16:88849363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565753254[chr16:88849363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88848848 88849572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737246
chr16 88848848 88849572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223779
chr16 88848886 88849410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737252
chr16 88848886 88849410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223786
chr16 88849361 88849375 GLIS3 JASPAR yes 12304053
Genes associated with rs565753254[chr16:88849363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More