EnhancerDB
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  3. rs565776790[chr1:151898460]
Enhancers that have rs565776790[chr1:151898460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs565776790[chr1:151898460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151897602 151899108 ZNF143 GTRD no Epithelial (MCF-7) 21338080
chr1 151897625 151898636 ZNF143 GTRD no Epithelial (MCF-7) 21338081
chr1 151897711 151899086 ZNF143 GTRD no Epithelial (MCF-7) 21338082
chr1 151897837 151898936 ZNF274 GTRD no Bone Marrow (K562) 21338086
chr1 151897926 151898572 ZNF274 GTRD no Bone Marrow (K562) 21338087
chr1 151898046 151898687 ZNF274 GTRD no Bone Marrow (K562) 21338088
chr1 151898116 151898570 ZNF274 GTRD no Bone Marrow (K562) 21338090
chr1 151898191 151898901 TCF7L2 GTRD no Colon (HCT116) 21338091
chr1 151898201 151898537 TCF7L2 GTRD no Colon (HCT116) 21338092
chr1 151898288 151898503 ZNF274 GTRD no Bone Marrow (K562) 21338093
chr1 151898437 151899169 GATA3 GTRD no Thymus 21338094
chr1 151898441 151898462 IRF1 JASPAR yes 32203231
chr1 151898442 151898463 IRF1 JASPAR yes 32203232
chr1 151898447 151898468 IRF1 JASPAR yes 32203234
chr1 151898448 151898463 FOXP1 JASPAR yes 32203235
chr1 151898448 151898469 IRF1 JASPAR yes 32203236
chr1 151898449 151898461 FOXC2 JASPAR yes 32203237
chr1 151898452 151898467 FOXP1 JASPAR yes 32203239
chr1 151898453 151898468 FOXP1 JASPAR yes 32203240
chr1 151898454 151898469 FOXP1 JASPAR yes 32203241
chr1 151898455 151898470 FOXP1 JASPAR yes 32203242
Genes associated with rs565776790[chr1:151898460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More