EnhancerDB
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  3. rs565857389[chr1:25094076]
Enhancers that have rs565857389[chr1:25094076]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565857389[chr1:25094076]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25094066 25094081 HNF4A JASPAR yes 27529100
chr1 25094067 25094081 NR2F1 JASPAR yes 27529101
chr1 25094067 25094081 RXRB JASPAR yes 27529102
chr1 25094067 25094081 RXRG JASPAR yes 27529103
chr1 25094067 25094082 HNF4G JASPAR yes 27529104
chr1 25094067 25094082 NR2C2 JASPAR yes 27529105
chr1 25094069 25094085 SOX4 JASPAR yes 27529106
chr1 25094076 25094091 FOXA1 JASPAR yes 27529107
Genes associated with rs565857389[chr1:25094076], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More