EnhancerDB
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  3. rs565945965[chr1:212767765]
Enhancers that have rs565945965[chr1:212767765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs565945965[chr1:212767765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212767748 212767769 IRF1 JASPAR yes 35139243
chr1 212767749 212767770 IRF1 JASPAR yes 35139245
chr1 212767750 212767765 IRF9 JASPAR yes 35139246
chr1 212767751 212767765 IRF7 JASPAR yes 35139247
chr1 212767752 212767770 IRF2 JASPAR yes 35139248
chr1 212767753 212767768 STAT2 JASPAR yes 35139249
chr1 212767754 212767769 FOXP1 JASPAR yes 35139250
chr1 212767754 212767775 IRF1 JASPAR yes 35139251
chr1 212767755 212767766 FOXA1 JASPAR yes 35139252
chr1 212767755 212767776 IRF1 JASPAR yes 35139253
chr1 212767756 212767767 FOXC1 JASPAR yes 35139254
chr1 212767756 212767768 FOXC2 JASPAR yes 35139255
chr1 212767757 212767768 FOXP2 JASPAR yes 35139256
chr1 212767757 212767771 IRF7 JASPAR yes 35139257
chr1 212767759 212767768 SRY JASPAR yes 35139258
Genes associated with rs565945965[chr1:212767765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More