EnhancerDB
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  3. rs566007942[chr1:27749413]
Enhancers that have rs566007942[chr1:27749413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566007942[chr1:27749413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27749401 27749415 PLAG1 JASPAR yes 27692005
chr1 27749408 27749413 SP1 TRANSFAC yes 27692006
chr1 27749409 27749414 SP1 TRANSFAC yes 27692007
Genes associated with rs566007942[chr1:27749413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More