EnhancerDB
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  3. rs566021726[chr12:120667578]
Enhancers that have rs566021726[chr12:120667578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566021726[chr12:120667578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063015
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063016
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063017
chr12 120667565 120667580 TFAP2A JASPAR yes 124156441
chr12 120667565 120667580 TFAP2C JASPAR yes 124156442
chr12 120667567 120667582 TFAP2A JASPAR yes 124156443
chr12 120667567 120667582 TFAP2C JASPAR yes 124156444
chr12 120667568 120667580 TFAP2A JASPAR yes 124156445
chr12 120667568 120667580 TFAP2B JASPAR yes 124156446
chr12 120667568 120667580 TFAP2C JASPAR yes 124156447
chr12 120667572 120667581 THAP1 JASPAR yes 124156448
chr12 120667572 120667587 NR2C2 JASPAR yes 124156449
chr12 120667573 120667587 PLAG1 JASPAR yes 124156450
chr12 120667573 120667587 RXRG JASPAR yes 124156451
chr12 120667575 120667579 LFA1 TRANSFAC yes 124156452
Genes associated with rs566021726[chr12:120667578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More