EnhancerDB
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  3. rs566061548[chr12:52514687]
Enhancers that have rs566061548[chr12:52514687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs566061548[chr12:52514687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52513239 52515430 P63 GTRD no Skin (Keratinocyte) 21546177
chr12 52513383 52514799 P63 GTRD no Skin (Keratinocyte) 21546180
chr12 52513384 52515273 P63 GTRD no Skin (Keratinocyte) 21546181
chr12 52514681 52514694 TFAP2A JASPAR yes 120918795
chr12 52514681 52514694 TFAP2B JASPAR yes 120918796
chr12 52514681 52514694 TFAP2C JASPAR yes 120918797
chr12 52514681 52514696 TFAP2A JASPAR yes 120918798
chr12 52514681 52514696 TFAP2C JASPAR yes 120918799
chr12 52514682 52514691 TFAP2A JASPAR yes 120918800
chr12 52514682 52514693 EBF1 JASPAR yes 120918801
Genes associated with rs566061548[chr12:52514687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More