EnhancerDB
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  3. rs566102117[chr15:42208186]
Enhancers that have rs566102117[chr15:42208186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566102117[chr15:42208186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42208176 42208192 E2F2 JASPAR yes 23004546
chr15 42208186 42208195 CDX1 JASPAR yes 23004547
chr15 42208186 42208197 CDX2 JASPAR yes 23004548
Genes associated with rs566102117[chr15:42208186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More