EnhancerDB
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  3. rs566117231[chr1:10117802]
Enhancers that have rs566117231[chr1:10117802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566117231[chr1:10117802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10117787 10117802 FOXP1 JASPAR yes 26697837
chr1 10117788 10117803 FOXP1 JASPAR yes 26697838
chr1 10117789 10117804 FOXP1 JASPAR yes 26697839
chr1 10117789 10117810 IRF1 JASPAR yes 26697840
chr1 10117790 10117805 FOXP1 JASPAR yes 26697841
chr1 10117790 10117811 IRF1 JASPAR yes 26697842
chr1 10117791 10117806 FOXP1 JASPAR yes 26697843
chr1 10117793 10117808 FOXP1 JASPAR yes 26697844
chr1 10117794 10117815 IRF1 JASPAR yes 26697845
chr1 10117795 10117810 FOXP1 JASPAR yes 26697846
chr1 10117798 10117812 SPIC JASPAR yes 26697847
chr1 10117798 10117812 STAT1 JASPAR yes 26697848
chr1 10117798 10117813 PRDM1 JASPAR yes 26697849
chr1 10117798 10117813 STAT2 JASPAR yes 26697850
chr1 10117800 10117821 IRF1 JASPAR yes 26697851
Genes associated with rs566117231[chr1:10117802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More