EnhancerDB
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  3. rs566154473[chr19:2638375]
Enhancers that have rs566154473[chr19:2638375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566154473[chr19:2638375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2638358 2638379 IRF1 JASPAR yes 112087218
chr19 2638358 2638379 ZNF263 JASPAR yes 112087219
chr19 2638359 2638380 IRF1 JASPAR yes 112087221
chr19 2638361 2638382 ZNF263 JASPAR yes 112087222
chr19 2638363 2638378 STAT2 JASPAR yes 112087223
chr19 2638364 2638379 FOXP1 JASPAR yes 112087224
chr19 2638364 2638385 IRF1 JASPAR yes 112087225
chr19 2638366 2638387 ZNF263 JASPAR yes 112087226
chr19 2638368 2638383 PRDM1 JASPAR yes 112087227
chr19 2638370 2638391 IRF1 JASPAR yes 112087228
chr19 2638371 2638392 ZNF263 JASPAR yes 112087229
chr19 2638373 2638394 ZNF263 JASPAR yes 112087230
chr19 2638374 2638388 SPI1 JASPAR yes 112087231
chr19 2638374 2638388 SPIC JASPAR yes 112087232
Genes associated with rs566154473[chr19:2638375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More