EnhancerDB
  1. Home
  2. SNP
  3. rs566172220[chr16:69206980]
Enhancers that have rs566172220[chr16:69206980]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69203285 69215888 enh31895
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs566172220[chr16:69206980]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69206969 69206981 POU3F1 JASPAR yes 11249506
chr16 69206969 69206982 POU3F3 JASPAR yes 11249507
chr16 69206970 69206988 SRF JASPAR yes 11249508
chr16 69206972 69206983 CDX2 JASPAR yes 11249510
chr16 69206972 69206983 RUNX1 JASPAR yes 11249511
chr16 69206973 69206985 SRF JASPAR yes 11249512
chr16 69206974 69206983 CDX1 JASPAR yes 11249513
Genes associated with rs566172220[chr16:69206980], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More