EnhancerDB
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  3. rs566245286[chr17:41488548]
Enhancers that have rs566245286[chr17:41488548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566245286[chr17:41488548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41488527 41488548 ZNF263 JASPAR yes 54343612
chr17 41488530 41488551 IRF1 JASPAR yes 54343614
chr17 41488530 41488551 ZNF263 JASPAR yes 54343615
chr17 41488532 41488553 IRF1 JASPAR yes 54343616
chr17 41488534 41488555 IRF1 JASPAR yes 54343617
chr17 41488538 41488559 IRF1 JASPAR yes 54343618
chr17 41488540 41488555 PRDM1 JASPAR yes 54343619
chr17 41488540 41488555 STAT2 JASPAR yes 54343620
chr17 41488541 41488555 SPIC JASPAR yes 54343621
chr17 41488541 41488555 STAT1 JASPAR yes 54343622
chr17 41488542 41488563 IRF1 JASPAR yes 54343623
chr17 41488543 41488558 FOXP1 JASPAR yes 54343624
chr17 41488543 41488564 IRF1 JASPAR yes 54343625
chr17 41488544 41488565 IRF1 JASPAR yes 54343626
chr17 41488545 41488560 FOXP1 JASPAR yes 54343627
chr17 41488545 41488566 IRF1 JASPAR yes 54343628
chr17 41488546 41488567 IRF1 JASPAR yes 54343629
chr17 41488547 41488562 FOXP1 JASPAR yes 54343630
chr17 41488547 41488568 IRF1 JASPAR yes 54343631
chr17 41488548 41488563 FOXP1 JASPAR yes 54343632
Genes associated with rs566245286[chr17:41488548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More