EnhancerDB
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  3. rs566260319[chr1:167772121]
Enhancers that have rs566260319[chr1:167772121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566260319[chr1:167772121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167771461 167772182 TCF7L2 GTRD no Colon (HCT116) 21347309
chr1 167771587 167772258 P63 GTRD no Skin (Keratinocyte) 21347311
chr1 167771599 167772430 P63 GTRD no Skin (Keratinocyte) 21347312
chr1 167771633 167772163 TCF7L2 GTRD no Colon (HCT116) 21347313
chr1 167772117 167772122 SP1 TRANSFAC yes 32894915
Genes associated with rs566260319[chr1:167772121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More