EnhancerDB
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  3. rs566270950[chr1:1791495]
Enhancers that have rs566270950[chr1:1791495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566270950[chr1:1791495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1791488 1791499 CDX2 JASPAR yes 26208112
chr1 1791488 1791503 FOXP1 JASPAR yes 26208113
chr1 1791489 1791500 HOXA10 JASPAR yes 26208115
chr1 1791489 1791510 IRF1 JASPAR yes 26208116
chr1 1791490 1791499 CDX1 JASPAR yes 26208117
chr1 1791490 1791500 HOXA13 JASPAR yes 26208118
chr1 1791490 1791500 HOXB13 JASPAR yes 26208119
chr1 1791490 1791500 HOXD13 JASPAR yes 26208120
chr1 1791490 1791505 FOXP1 JASPAR yes 26208121
chr1 1791493 1791508 STAT2 JASPAR yes 26208122
chr1 1791494 1791500 TBP TRANSFAC yes 26208123
Genes associated with rs566270950[chr1:1791495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More