EnhancerDB
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  3. rs566276907[chr2:37876051]
Enhancers that have rs566276907[chr2:37876051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37873616 37895683 enh5417
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
chr2 37875700 37876061 vista31035
VISTA
Transcript factors that have rs566276907[chr2:37876051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37876036 37876051 TFAP2A JASPAR yes 22034379
chr2 37876036 37876051 TFAP2C JASPAR yes 22034380
chr2 37876036 37876051 TFAP2A JASPAR yes 73070736
chr2 37876036 37876051 TFAP2C JASPAR yes 73070737
chr2 37876045 37876057 NHLH1 JASPAR yes 22034381
chr2 37876045 37876057 NHLH1 JASPAR yes 73070738
chr2 37876045 37876058 ZBTB18 JASPAR yes 22034382
chr2 37876045 37876058 ZBTB18 JASPAR yes 73070739
chr2 37876046 37876056 MSC JASPAR yes 22034383
chr2 37876046 37876056 MYF6 JASPAR yes 22034384
chr2 37876046 37876056 NHLH1 JASPAR yes 22034385
chr2 37876046 37876056 TFAP4 JASPAR yes 22034386
chr2 37876046 37876056 MSC JASPAR yes 73070740
chr2 37876046 37876056 MYF6 JASPAR yes 73070741
chr2 37876046 37876056 NHLH1 JASPAR yes 73070742
chr2 37876046 37876056 TFAP4 JASPAR yes 73070743
chr2 37876051 37876060 THAP1 JASPAR yes 22034387
chr2 37876051 37876060 THAP1 JASPAR yes 73070744
Genes associated with rs566276907[chr2:37876051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More