EnhancerDB
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  3. rs566317624[chr2:102334576]
Enhancers that have rs566317624[chr2:102334576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566317624[chr2:102334576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102334564 102334583 PAX5 JASPAR yes 75830346
chr2 102334571 102334580 HIC2 JASPAR yes 75830347
chr2 102334574 102334578 LFA1 TRANSFAC yes 75830348
chr2 102334574 102334594 TP63 JASPAR yes 75830349
chr2 102334575 102334593 TP53 JASPAR yes 75830350
chr2 102334575 102334593 TP63 JASPAR yes 75830351
chr2 102334575 102334593 TP73 JASPAR yes 75830352
Genes associated with rs566317624[chr2:102334576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More