EnhancerDB
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  3. rs566334871[chr1:19776658]
Enhancers that have rs566334871[chr1:19776658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566334871[chr1:19776658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19776637 19776658 IRF1 JASPAR yes 27191932
chr1 19776638 19776659 IRF1 JASPAR yes 27191934
chr1 19776639 19776660 IRF1 JASPAR yes 27191936
chr1 19776640 19776661 IRF1 JASPAR yes 27191938
chr1 19776641 19776662 IRF1 JASPAR yes 27191940
chr1 19776642 19776663 IRF1 JASPAR yes 27191942
chr1 19776643 19776658 FOXP1 JASPAR yes 27191943
chr1 19776643 19776664 IRF1 JASPAR yes 27191944
chr1 19776644 19776659 FOXP1 JASPAR yes 27191945
chr1 19776644 19776665 IRF1 JASPAR yes 27191946
chr1 19776645 19776660 FOXP1 JASPAR yes 27191947
chr1 19776645 19776666 IRF1 JASPAR yes 27191948
chr1 19776646 19776661 FOXP1 JASPAR yes 27191949
chr1 19776646 19776667 IRF1 JASPAR yes 27191950
chr1 19776647 19776662 FOXP1 JASPAR yes 27191951
chr1 19776647 19776668 IRF1 JASPAR yes 27191952
chr1 19776648 19776663 FOXP1 JASPAR yes 27191953
chr1 19776648 19776669 IRF1 JASPAR yes 27191954
chr1 19776649 19776664 FOXP1 JASPAR yes 27191955
chr1 19776651 19776666 FOXP1 JASPAR yes 27191956
chr1 19776652 19776673 IRF1 JASPAR yes 27191957
chr1 19776653 19776668 FOXP1 JASPAR yes 27191958
chr1 19776653 19776674 IRF1 JASPAR yes 27191959
chr1 19776657 19776678 IRF1 JASPAR yes 27191960
chr1 19776658 19776673 FOXP1 JASPAR yes 27191961
chr1 19776658 19776679 IRF1 JASPAR yes 27191962
Genes associated with rs566334871[chr1:19776658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More