EnhancerDB
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  3. rs566443601[chr17:2775858]
Enhancers that have rs566443601[chr17:2775858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566443601[chr17:2775858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2775842 2775860 NR3C1 JASPAR yes 52780347
chr17 2775850 2775865 STAT1 JASPAR yes 52780348
chr17 2775852 2775863 STAT1 JASPAR yes 52780349
chr17 2775852 2775863 STAT3 JASPAR yes 52780350
chr17 2775853 2775868 HSF1 JASPAR yes 52780351
Genes associated with rs566443601[chr17:2775858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More