EnhancerDB
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  3. rs566577677[chr19:2608049]
Enhancers that have rs566577677[chr19:2608049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566577677[chr19:2608049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2608046 2608061 FOXP1 JASPAR yes 112082303
chr19 2608047 2608062 FOXP1 JASPAR yes 112082304
chr19 2608047 2608068 IRF1 JASPAR yes 112082305
chr19 2608048 2608063 FOXP1 JASPAR yes 112082306
chr19 2608048 2608069 IRF1 JASPAR yes 112082307
chr19 2608049 2608064 FOXP1 JASPAR yes 112082308
chr19 2608049 2608070 IRF1 JASPAR yes 112082309
Genes associated with rs566577677[chr19:2608049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More