EnhancerDB
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  3. rs566598048[chr1:230240288]
Enhancers that have rs566598048[chr1:230240288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566598048[chr1:230240288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230240256 230240696 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21391271
chr1 230240256 230240696 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107878466
chr1 230240256 230240845 SIN3AK20 UCSC Txn Factor no Conserved 107878467
chr1 230240266 230240926 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391272
chr1 230240266 230240926 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878468
chr1 230240274 230240630 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391273
chr1 230240274 230240630 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878469
chr1 230240276 230240297 ZNF263 JASPAR yes 36020866
chr1 230240279 230240300 ZNF263 JASPAR yes 36020867
chr1 230240282 230240303 ZNF263 JASPAR yes 36020868
Genes associated with rs566598048[chr1:230240288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More