EnhancerDB
  1. Home
  2. SNP
  3. rs566680477[chr6:88425835]
Enhancers that have rs566680477[chr6:88425835]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566680477[chr6:88425835]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88425834 88425846 FOXC2 JASPAR yes 103323777
chr6 88425835 88425847 FOXI1 JASPAR yes 103323778
Genes associated with rs566680477[chr6:88425835], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More