EnhancerDB
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  3. rs566680656[chr6:16334189]
Enhancers that have rs566680656[chr6:16334189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566680656[chr6:16334189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16334189 16334200 CDX2 JASPAR yes 100288613
chr6 16334189 16334206 PAX1 JASPAR yes 100288614
chr6 16334189 16334206 PAX9 JASPAR yes 100288615
Genes associated with rs566680656[chr6:16334189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More