EnhancerDB
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  3. rs566750029[chr19:4378440]
Enhancers that have rs566750029[chr19:4378440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566750029[chr19:4378440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4378430 4378440 ID4 JASPAR yes 112170224
chr19 4378430 4378440 TCF3 JASPAR yes 112170225
chr19 4378430 4378440 TCF4 JASPAR yes 112170226
chr19 4378432 4378441 ZEB1 JASPAR yes 112170227
chr19 4378438 4378449 FOSL2 JASPAR yes 112170228
chr19 4378440 4378453 SMAD2 JASPAR yes 112170229
Genes associated with rs566750029[chr19:4378440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More