EnhancerDB
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  3. rs566888075[chr1:117405496]
Enhancers that have rs566888075[chr1:117405496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs566888075[chr1:117405496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117404330 117405565 ZNF143 GTRD no Epithelial (MCF-7) 21333990
chr1 117404569 117405526 ZNF143 GTRD no Epithelial (MCF-7) 21333991
chr1 117404590 117405633 ZNF143 GTRD no Epithelial (MCF-7) 21333992
chr1 117404601 117405637 ZNF143 GTRD no Epithelial (MCF-7) 21333993
chr1 117404814 117405524 ZNF143 GTRD no Epithelial (MCF-7) 21333998
chr1 117405478 117405498 ESR1 JASPAR yes 31846191
Genes associated with rs566888075[chr1:117405496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More