EnhancerDB
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  3. rs56690769[chr1:39633559]
Enhancers that have rs56690769[chr1:39633559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs56690769[chr1:39633559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39633157 39634345 ZNF274 GTRD no Bone Marrow (K562) 107802894
chr1 39633544 39633559 FOXP1 JASPAR yes 28261612
chr1 39633544 39633565 IRF1 JASPAR yes 28261613
chr1 39633545 39633560 FOXP1 JASPAR yes 28261614
chr1 39633546 39633567 IRF1 JASPAR yes 28261615
chr1 39633547 39633562 FOXP1 JASPAR yes 28261616
chr1 39633548 39633563 STAT2 JASPAR yes 28261617
chr1 39633548 39633569 IRF1 JASPAR yes 28261618
chr1 39633549 39633564 FOXP1 JASPAR yes 28261619
chr1 39633550 39633571 IRF1 JASPAR yes 28261620
chr1 39633552 39633573 IRF1 JASPAR yes 28261621
chr1 39633554 39633569 PRDM1 JASPAR yes 28261622
Genes associated with rs56690769[chr1:39633559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More