EnhancerDB
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  3. rs566965744[chr17:43252540]
Enhancers that have rs566965744[chr17:43252540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs566965744[chr17:43252540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43252535 43252550 MEF2C JASPAR yes 54433346
chr17 43252538 43252553 FOXP1 JASPAR yes 54433347
chr17 43252539 43252554 FOXP1 JASPAR yes 54433348
chr17 43252539 43252560 IRF1 JASPAR yes 54433349
chr17 43252540 43252555 FOXP1 JASPAR yes 54433350
chr17 43252540 43252561 IRF1 JASPAR yes 54433351
Genes associated with rs566965744[chr17:43252540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More