EnhancerDB
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  3. rs566967825[chr1:8199688]
Enhancers that have rs566967825[chr1:8199688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs566967825[chr1:8199688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8199678 8199693 LEF1 JASPAR yes 26518448
chr1 8199683 8199691 GATA3 JASPAR yes 26518449
chr1 8199684 8199705 IRF1 JASPAR yes 26518450
chr1 8199686 8199701 STAT2 JASPAR yes 26518451
chr1 8199687 8199701 STAT1 JASPAR yes 26518452
chr1 8199688 8199703 IRF9 JASPAR yes 26518453
Genes associated with rs566967825[chr1:8199688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More