EnhancerDB
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  3. rs567000831[chr17:80502839]
Enhancers that have rs567000831[chr17:80502839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs567000831[chr17:80502839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80502834 80502849 HNF1A JASPAR yes 56372872
chr17 80502838 80502848 GSX2 JASPAR yes 56372873
chr17 80502838 80502848 HOXB2 JASPAR yes 56372874
chr17 80502838 80502848 HOXB3 JASPAR yes 56372875
chr17 80502838 80502848 MNX1 JASPAR yes 56372876
chr17 80502838 80502848 POU6F1 JASPAR yes 56372877
chr17 80502838 80502849 HOXA10 JASPAR yes 56372878
chr17 80502839 80502847 LMX1A JASPAR yes 56372879
chr17 80502839 80502847 LMX1B JASPAR yes 56372880
chr17 80502839 80502847 NKX6-1 JASPAR yes 56372881
chr17 80502839 80502847 NKX6-2 JASPAR yes 56372882
chr17 80502839 80502847 VAX1 JASPAR yes 56372883
chr17 80502839 80502847 VAX2 JASPAR yes 56372884
chr17 80502839 80502847 VSX1 JASPAR yes 56372885
chr17 80502839 80502847 VSX2 JASPAR yes 56372886
Genes associated with rs567000831[chr17:80502839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More