EnhancerDB
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  3. rs567538710[chr1:171394546]
Enhancers that have rs567538710[chr1:171394546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs567538710[chr1:171394546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171394537 171394547 TBX21 JASPAR yes 33079153
chr1 171394537 171394548 TBX2 JASPAR yes 33079154
chr1 171394537 171394550 EOMES JASPAR yes 33079155
chr1 171394538 171394548 TBR1 JASPAR yes 33079156
chr1 171394542 171394552 ALX3 JASPAR yes 33079157
chr1 171394542 171394552 ESX1 JASPAR yes 33079158
chr1 171394542 171394552 HESX1 JASPAR yes 33079159
chr1 171394542 171394552 LBX2 JASPAR yes 33079160
chr1 171394542 171394552 MIXL1 JASPAR yes 33079161
chr1 171394542 171394552 RAX JASPAR yes 33079162
chr1 171394543 171394551 ISX JASPAR yes 33079163
chr1 171394543 171394551 LHX9 JASPAR yes 33079164
chr1 171394543 171394551 LMX1B JASPAR yes 33079165
chr1 171394543 171394551 PRRX1 JASPAR yes 33079166
chr1 171394543 171394551 RAX2 JASPAR yes 33079167
chr1 171394543 171394551 SHOX JASPAR yes 33079168
chr1 171394543 171394551 UNCX JASPAR yes 33079169
chr1 171394546 171394551 MYB TRANSFAC yes 33079170
Genes associated with rs567538710[chr1:171394546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More