EnhancerDB
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  3. rs567623508[chr12:109061339]
Enhancers that have rs567623508[chr12:109061339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109055765 109067015 enh2584
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 109061186 109061401 vista14828
VISTA
Transcript factors that have rs567623508[chr12:109061339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109061134 109061355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571410
chr12 109061134 109061355 SPI1 UCSC Txn Factor no Conserved 108057160
chr12 109061134 109061355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057161
chr12 109061330 109061346 RFX2 JASPAR yes 82473668
chr12 109061330 109061346 RFX3 JASPAR yes 82473669
chr12 109061330 109061346 RFX4 JASPAR yes 82473670
chr12 109061330 109061346 RFX5 JASPAR yes 82473671
chr12 109061330 109061346 RFX2 JASPAR yes 123610860
chr12 109061330 109061346 RFX3 JASPAR yes 123610861
chr12 109061330 109061346 RFX4 JASPAR yes 123610862
chr12 109061330 109061346 RFX5 JASPAR yes 123610863
chr12 109061333 109061349 SOX4 JASPAR yes 82473672
chr12 109061333 109061349 SOX4 JASPAR yes 123610864
Genes associated with rs567623508[chr12:109061339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More