EnhancerDB
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  3. rs567653806[chr17:48963279]
Enhancers that have rs567653806[chr17:48963279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs567653806[chr17:48963279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48961931 48963720 TCF7L2 GTRD no Colon (HCT116) 21770234
chr17 48962814 48963469 ZNF143 GTRD no Epithelial (MCF-7) 21770250
chr17 48963129 48963370 ZNF143 GTRD no Epithelial (MCF-7) 21770251
chr17 48963273 48963294 IRF1 JASPAR yes 54728994
chr17 48963275 48963296 IRF1 JASPAR yes 54728995
chr17 48963276 48963297 IRF1 JASPAR yes 54728996
chr17 48963277 48963298 IRF1 JASPAR yes 54728997
chr17 48963278 48963293 FOXP1 JASPAR yes 54728998
chr17 48963278 48963299 IRF1 JASPAR yes 54728999
chr17 48963279 48963294 FOXP1 JASPAR yes 54729000
chr17 48963279 48963300 IRF1 JASPAR yes 54729001
Genes associated with rs567653806[chr17:48963279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More