EnhancerDB
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  3. rs56780209[chr17:65402707]
Enhancers that have rs56780209[chr17:65402707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56780209[chr17:65402707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65402696 65402708 MEF2A JASPAR yes 55499203
chr17 65402696 65402708 MEF2B JASPAR yes 55499204
chr17 65402696 65402708 MEF2D JASPAR yes 55499205
chr17 65402697 65402707 MEF2A JASPAR yes 55499206
chr17 65402701 65402722 IRF1 JASPAR yes 55499208
chr17 65402703 65402718 STAT2 JASPAR yes 55499209
chr17 65402706 65402721 FOXP1 JASPAR yes 55499210
chr17 65402707 65402722 FOXP1 JASPAR yes 55499211
Genes associated with rs56780209[chr17:65402707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More