EnhancerDB
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  3. rs56792852[chr6:16348107]
Enhancers that have rs56792852[chr6:16348107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56792852[chr6:16348107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16348099 16348114 LEF1 JASPAR yes 100290799
chr6 16348103 16348109 LEF1 TRANSFAC yes 100290800
chr6 16348103 16348109 SOX10 JASPAR yes 100290801
Genes associated with rs56792852[chr6:16348107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More