EnhancerDB
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  3. rs568043779[chr12:116961301]
Enhancers that have rs568043779[chr12:116961301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs568043779[chr12:116961301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116960903 116961570 TCF7L2 GTRD no Colon (HCT116) 21577227
chr12 116961018 116961504 TCF7L2 GTRD no Colon (HCT116) 21577228
chr12 116961280 116961301 ZNF263 JASPAR yes 124006218
chr12 116961285 116961306 IRF1 JASPAR yes 124006219
chr12 116961288 116961302 SPI1 JASPAR yes 124006220
chr12 116961288 116961302 SPIC JASPAR yes 124006221
chr12 116961289 116961310 IRF1 JASPAR yes 124006223
chr12 116961290 116961311 IRF1 JASPAR yes 124006224
chr12 116961294 116961309 FOXP1 JASPAR yes 124006226
chr12 116961294 116961315 IRF1 JASPAR yes 124006227
chr12 116961295 116961310 FOXP1 JASPAR yes 124006228
chr12 116961295 116961316 IRF1 JASPAR yes 124006229
chr12 116961296 116961311 FOXP1 JASPAR yes 124006230
chr12 116961296 116961317 IRF1 JASPAR yes 124006231
chr12 116961300 116961321 IRF1 JASPAR yes 124006232
chr12 116961301 116961316 FOXP1 JASPAR yes 124006233
Genes associated with rs568043779[chr12:116961301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More