EnhancerDB
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  3. rs568078541[chr1:168443924]
Enhancers that have rs568078541[chr1:168443924]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs568078541[chr1:168443924]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168443345 168444229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348267
chr1 168443540 168443956 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348268
chr1 168443554 168443994 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348269
chr1 168443873 168444290 ZNF274 GTRD no Bone Marrow (K562) 21348270
chr1 168443924 168443939 STAT1 JASPAR yes 32929221
Genes associated with rs568078541[chr1:168443924], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More