EnhancerDB
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  3. rs568240182[chr6:47108480]
Enhancers that have rs568240182[chr6:47108480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs568240182[chr6:47108480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47108467 47108483 E2F2 JASPAR yes 102002874
chr6 47108471 47108483 PKNOX2 JASPAR yes 102002879
chr6 47108472 47108482 ID4 JASPAR yes 102002880
chr6 47108472 47108482 TCF3 JASPAR yes 102002881
chr6 47108472 47108482 TCF4 JASPAR yes 102002882
chr6 47108473 47108482 SNAI2 JASPAR yes 102002883
chr6 47108475 47108481 PTF TRANSFAC yes 102002885
Genes associated with rs568240182[chr6:47108480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More