EnhancerDB
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  3. rs568341100[chr12:109238992]
Enhancers that have rs568341100[chr12:109238992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs568341100[chr12:109238992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109238972 109238993 IRF1 JASPAR yes 123626322
chr12 109238973 109238994 IRF1 JASPAR yes 123626324
chr12 109238974 109238995 IRF1 JASPAR yes 123626326
chr12 109238978 109238993 PRDM1 JASPAR yes 123626328
chr12 109238978 109238993 STAT2 JASPAR yes 123626329
chr12 109238980 109239001 IRF1 JASPAR yes 123626330
chr12 109238984 109238999 FOXP1 JASPAR yes 123626331
chr12 109238986 109239001 FOXP1 JASPAR yes 123626332
chr12 109238986 109239007 IRF1 JASPAR yes 123626333
chr12 109238987 109239008 IRF1 JASPAR yes 123626334
chr12 109238988 109239003 FOXP1 JASPAR yes 123626335
chr12 109238990 109238996 TBP TRANSFAC yes 123626336
chr12 109238990 109239005 FOXP1 JASPAR yes 123626337
chr12 109238991 109239012 IRF1 JASPAR yes 123626338
chr12 109238992 109239007 FOXP1 JASPAR yes 123626339
Genes associated with rs568341100[chr12:109238992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More