EnhancerDB
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  3. rs568389871[chr17:43379100]
Enhancers that have rs568389871[chr17:43379100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs568389871[chr17:43379100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43378661 43379289 TCF7L2 GTRD no Colon (HCT116) 21764234
chr17 43378661 43379470 TCF7L2 GTRD no Colon (HCT116) 21764235
chr17 43378765 43379320 TCF7L2 GTRD no Colon (HCT116) 21764236
chr17 43378770 43379303 ZNF143 GTRD no Epithelial (MCF-7) 21764237
chr17 43378803 43379303 TCF7L2 GTRD no Colon (HCT116) 21764238
chr17 43378812 43379311 TCF7L2 GTRD no Colon (HCT116) 21764239
chr17 43378948 43379468 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764240
chr17 43379015 43379611 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764241
chr17 43379034 43379630 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764242
chr17 43379096 43379426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764243
chr17 43379098 43379118 RREB1 JASPAR yes 54441483
Genes associated with rs568389871[chr17:43379100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More